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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947561.1_cds_XP_016489208.1_79756
CDS Infomation

[gene=LOC107809122] [db_xref=GeneID:107809122] [protein=aspartic proteinase A1-like] [protein_id=XP_016489208.1] [location=join(39592..39948,40037..40097,41066..41160,41231..41343,41560..41728,41818..41857,41968..42032,43167..43286)] [gbkey=CDS]
Sequence

ATGGGTACTACATATGGAACCTATTTAACTGCACTGTGTTTGTTGCTTCTTTTATCCCCT
ATGGCGTTTTCTGTATCAAATGATGGACTGATCAGAGTTGGAATTAAGAAGAGGAAGTTG
GATCAGATCAACCAGGCTTTTGGTGGTATTGATTCTAATGGAGCAAATTCTGCAAGAACT
TATCATCTTGTCGGAAATATAGGAGATTCAGATACTGATATTGTTGCACTAAAGAACTAC
TTGGATGCTCAGTATTTTGGTGAGATTTGCATTGGATCACCACCTCAAAAGTTCACTGTG
ATCTTTGATACCGGAAGTTCTAATCTTTGGGTGCCCTCTGCAAGATGTTATTTTTCACTT
GCTTGTTATTTGCACCCCAAGTACAAGTCAAGTCATTCCAGTACCTACAAAAAGAATGGC
ACATCTGCTGCAATTCGCTATGGAACTGGATCTATTTCTGGATACTTTAGCAATGACAAT
GTGAAAGTTGGTGATCTTATTGTCAAAGATCAGGACTTTATTGAGGCAACTCGAGAACCA
GGCATCACCTTTTTGGCTGCCAAGTTTGATGGTATTCTTGGTCTTGGATTTCAAGAGATA
TCTGTGGGGAAAGCCGTCCCCGTCTGGTACAATATGGTAAATCAAGGTCTTGTTAAGAAA
CCTATATTCTCTTTCTGGTTCAATCGGAATGCTCAAGAGGAAGAAGGGGGTGAACTTGTT
TTCGGTGGAGTTGATCCCAACCATTTCAAGGGTAAACATACATATGTTCCTGTAACTCAC
AAAGGCTACTGGCAGTTTGATATGGGTGACGTACTCGTCGGTGGTGAAACAACTGGGTTT
TGTTCAGGTGGTTGTTCAGCAATTGCAGATTCTGGAACATCCTTATTGGCAGGACCAACA
ACCATTATTACTCAAATTAATCATGCGATTGGAGCTTCAGGAGTCGTCAGCCAGGAGTGC
AAGTCATTAGTTACTGAATATGGAAAAACCATATTGGATCTACTAGAATCAAAGGTATGA

Peptide Sequence

PEP ID

XP_016489208.1
PEP Infomation

PREDICTED: aspartic proteinase A1-like [Nicotiana tabacum]
Sequence

MGTTYGTYLTALCLLLLLSPMAFSVSNDGLIRVGIKKRKLDQINQAFGGIDSNGANSART
YHLVGNIGDSDTDIVALKNYLDAQYFGEICIGSPPQKFTVIFDTGSSNLWVPSARCYFSL
ACYLHPKYKSSHSSTYKKNGTSAAIRYGTGSISGYFSNDNVKVGDLIVKDQDFIEATREP
GITFLAAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVKKPIFSFWFNRNAQEEEGGELV
FGGVDPNHFKGKHTYVPVTHKGYWQFDMGDVLVGGETTGFCSGGCSAIADSGTSLLAGPT
TIITQINHAIGASGVVSQECKSLVTEYGKTILDLLESKV

Transcript Sequence

Gene sequence data has not been registered.